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RDP Classifier 13 - Download




About RDP Classifier

The RDP Classifier is a naive Bayesian classifier that can rapidly and accurately provides taxonomic assignments from domain to genus, with confidence estimates for each assignment. More information can be found at ....

The RDP Classifier is a naive Bayesian classifier that can rapidly and accurately provides taxonomic assignments from domain to genus, with confidence estimates for each assignment. More information can be found at .
Features
  • Release 2.11 provides subcommand to display the pre-compiled taxonomy versions.
  • Release 2.10 provides gene copy number adjustment for 16S gene sequences.
  • Release 2.7 offers updated Fungal LSU training set No 11. The new Fungal LSU training set offers increased coverage of the Glomeromycota, Chytridiomycota and other basal lineages, with expanded non-fungal Eukarya phyla to better separate fungi from other eukaryotes.
  • The RDP Classifier now allows classification of both bacterial and archaeal 16S rRNA sequences, Fungal LSU and Fungal ITS sequences.
  • The RDP MultiClassifier has been merged with RDP Classifier as one single package. The new version of RDP Classifier now offers subcommands for classification, library comparing, retraining classifier, leave-one-out testing and cross validation. See instructions on . Many more RDP open source tools and usage examples on GitHub ().



Previous Versions

Here you can find the changelog of RDP Classifier since it was posted on our website on 2015-04-27 03:00:00. The latest version is 13 and it was updated on 2024-03-19 19:18:18. See below the changes in each version.

RDP Classifier version 13
Updated At: 2020-07-24
RDP Classifier version rdp-classifier
Updated At: 2010-04-06
Changes: Several fixes and updates


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Downloads: 519
Updated At: 2024-03-19 19:18:18
Publisher: wangqion
Operating System: Mac,windows,linux
License Type: Free